Structural mechanism of inhibition of the Rho transcription termination factor by Rof
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8w8d
Q-score: 0.452
Resolution: 3.32 Å
EM Method: Single-particle
Fitted PDBs: 8gk7
Q-score: 0.364
Wang H, Ishchenko A, Skudlarek J, Shen P, Dzhekieva L, Painter RE, Chen YT, Bukhtiyarova M, Leithead A, Tracy R, Babaoglu K, Bahnck-Teets C, Buevich A, Cabalu TD, Labroli M, Lange H, Lei Y, Li W, Liu J, Mann PA, Meng T, Mitchell HJ, Mulhearn J, Scapin G, Sha D, Shaw AW, Si Q, Tong L, Wu C, Wu Z, Xiao JC, Xu M, Zhang LK, McKenney D, Miller RR, Black TA, Cooke A, Balibar CJ, Klein DJ, Raheem I, Walker SS
Nat Microbiol (2024) [ Pubmed: 38649414 DOI: doi:10.1038/s41564-024-01667-0 ]
- 2-[(4-butylbenzene-1-sulfonyl)amino]-5-[(3-{4-[(4-butylbenzene-1-sulfonyl)amino]-3-carboxyanilino}-3-oxopropyl)carbamoyl]benzoic acid (778 Da, Ligand)
- Msba complexed with cerastecin c (450 kDa, Complex from Acinetobacter baumannii)
- Lipid a export atp-binding/permease protein msba (66 kDa, Protein from Acinetobacter baumannii)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 8ihq
Q-score: 0.632
Dai L, Niu D, Huang JW, Li X, Shen P, Li H, Xie Z, Min J, Hu Y, Yang Y, Guo RT, Chen CC
J Hazard Mater (2023) 458 pp. 131836-131836 [ Pubmed: 37331057 DOI: doi:10.1016/j.jhazmat.2023.131836 ]
- Zinc ion (65 Da, Ligand)
- Adh3 (Complex from Stenotrophomonas acidaminiphila)
- Amidohydrolase family protein (45 kDa, Protein from Stenotrophomonas acidaminiphila)
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with Phe
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8ihr
Q-score: 0.666
Dai L, Niu D, Huang JW, Li X, Shen P, Li H, Xie Z, Min J, Hu Y, Yang Y, Guo RT, Chen CC
J Hazard Mater (2023) 458 pp. 131836-131836 [ Pubmed: 37331057 DOI: doi:10.1016/j.jhazmat.2023.131836 ]
- Zinc ion (65 Da, Ligand)
- Adh3 (Complex from Stenotrophomonas acidaminiphila)
- Amidohydrolase family protein (45 kDa, Protein from Stenotrophomonas acidaminiphila)
- Phenylalanine (165 Da, Ligand)
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with ochratoxin A
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8ihs
Q-score: 0.645
Dai L, Niu D, Huang JW, Li X, Shen P, Li H, Xie Z, Min J, Hu Y, Yang Y, Guo RT, Chen CC
J Hazard Mater (2023) 458 pp. 131836-131836 [ Pubmed: 37331057 DOI: doi:10.1016/j.jhazmat.2023.131836 ]
- Amidohydrolase family protein (45 kDa, Protein from Stenotrophomonas acidaminiphila)
- Zinc ion (65 Da, Ligand)
- Adh3 (Complex from Stenotrophomonas acidaminiphila)
- (2~{s})-2-[[(3~{r})-5-chloranyl-3-methyl-8-oxidanyl-1-oxidanylidene-3,4-dihydroisochromen-7-yl]carbonylamino]-3-phenyl-propanoic acid (403 Da, Ligand)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8j85
Q-score: 0.568
Dai L, Niu D, Huang JW, Li X, Shen P, Li H, Xie Z, Min J, Hu Y, Yang Y, Guo RT, Chen CC
J Hazard Mater (2023) 458 pp. 131836-131836 [ Pubmed: 37331057 DOI: doi:10.1016/j.jhazmat.2023.131836 ]
- (2~{s})-2-[[(3~{r})-5-chloranyl-3-methyl-8-oxidanyl-1-oxidanylidene-3,4-dihydroisochromen-7-yl]carbonylamino]-3-phenyl-propanoic acid (403 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Adh3 (Complex from Stenotrophomonas acidaminiphila)
- Amidohydrolase family protein (45 kDa, Protein from Stenotrophomonas acidaminiphila)
Monroe N, Shen P, Han H, Sundquist WI, Hill CP
To Be Published
- Vps2p (Protein from Saccharomyces cerevisiae)
- Vps4 (Protein from Saccharomyces cerevisiae)
- Vps4-vta1 complex (Complex from Saccharomyces cerevisiae)
- Vta1p (Protein from Saccharomyces cerevisiae)
Monroe N, Shen P, Han H, Sundquist WI, Hill CP
To Be Published
- Vps2p (Protein from Saccharomyces cerevisiae)
- Vps4-vta1 complex (Complex from Saccharomyces cerevisiae)
- Vta1p (Protein from Saccharomyces cerevisiae)
- Vps4p (Protein from Saccharomyces cerevisiae)
Monroe N, Shen P, Han H, Sundquist WI, Hill CP
To Be Published
- Vps2p (Protein from Saccharomyces cerevisiae)
- Vps4-vta1 complex (Complex from Saccharomyces cerevisiae)
- Vta1p (Protein from Saccharomyces cerevisiae)
- Vps4p (Protein from Saccharomyces cerevisiae)
Monroe N, Shen P, Han H, Sundquist WI, Hill CP
To Be Published
- Vps2p (Protein from Saccharomyces cerevisiae)
- Vps4-vta1 complex (Complex from Saccharomyces cerevisiae)
- Vta1p (Protein from Saccharomyces cerevisiae)
- Vps4p (Protein from Saccharomyces cerevisiae)